[{"data":1,"prerenderedAt":327},["ShallowReactive",2],{"project-46833754":3},{"id":4,"name":5,"line":5,"line_source":6,"title":7,"url":8,"domain":9,"maker":10,"posted_at":11,"year":12,"points":13,"comments":14,"rank_in_year":15,"shown_in_year":16,"top":17,"tier":18,"category":19,"subcategory":20,"format":21,"keywords":22,"reception":28,"sentiment":29,"stance_mix":30,"scored_comments":35,"aspects":36,"strip":42,"post_text":43,"what":44,"said":76,"maker_in_thread":193,"shape":202,"grid":207,"attempts":287,"same_week":288,"maker_shows":318,"maker_hidden":319,"reader_version":320,"card":321},"46833754","Phage Explorer","title","Show HN: Phage Explorer","https:\u002F\u002Fphage-explorer.org\u002F","phage-explorer.org","eigenvalue",1769836923,2026,127,35,515,4366,12,"notable","learning_science","interactive biology education","web_app",[23,24,25,26,27],"phage","bacteriophage","genome visualization","virology education","protein structure","mixed",-0.069,{"positive":31,"neutral":32,"mixed":33,"critical":34},3,1,4,5,13,{"design":37,"execution":39,"docs":40,"idea":41},{"positive":38,"critical":32},0,{"positive":38,"critical":31},{"positive":38,"critical":32},{"positive":31,"critical":38},[31,32,38,38,32,32,38,38,38,38,38,31,38,38,38,38,38,38,38,38,32,31,31,38,38,38,38,32,38,38,31,38,34,34,34],"I got really interested in biology and genetics a few months ago, just for fun.\n\nThis was largely inspired by the work of Sydney Brenner, which became the basis of my brennerbot.org project.\n\nIn particular, I became very fascinated by phages, which are viruses that attack bacteria. They're the closest thing to the \"fundamental particles\" of biology: the minimal units of genetic code that do something useful that allows them to reproduce and spread.\n\nThey also have some incredible properties, like having a structure that somehow encodes an icosahedron.\n\nI always wondered how the DNA of these th",{"problem":45,"audience":51,"pricing":55,"motivation":56,"time_to_build":55,"stack":60,"openness":73,"stage":74,"team_size":75},{"value":46,"source":47,"evidence":48},"Understanding how phage genetic code relates to physical structure without a textbook","maker",[49],{"id":50},"post",{"value":52,"source":47,"evidence":53},"Curious learners and biology students; the maker invites experts to review",[54],{"id":50},null,{"value":57,"source":47,"evidence":58},"Personal interest in biology and genetics, learning by building",[59],{"id":50},[61,65,69],{"value":62,"source":47,"evidence":63},"TypeScript",[64],{"id":50},{"value":66,"source":47,"evidence":67},"Rust",[68],{"id":50},{"value":70,"source":47,"evidence":71},"WebAssembly",[72],{"id":50},"open_source","launched","solo",{"praise":77,"objections":105,"requests":149,"questions":170,"alternatives":181},[78,94],{"value":79,"source":80,"evidence":81},"Good premise and interesting educational goal","commenter",[82,86,90],{"id":83,"by":84,"text":85},"46835958","gtsnexp","The premise behind this vibe-coded website is excellent. It would have been great if a bit more effort had been invested in the visualization side and, if instead of using…",{"id":87,"by":88,"text":89},"46839432","wefzyn","Very good idea and very interesting. Great use of AI. The next step in this project, if you were funded, would be to have human experts double check the accuracy of the…",{"id":91,"by":92,"text":93},"46834235","bboydart91","I really resonate with your goal of creating a more intuitive tool than a boring textbook. Being able to visually see how complex genetic code translates into physical geometry…",{"value":95,"source":80,"evidence":96},"Interface looks nice",[97,101],{"id":98,"by":99,"text":100},"46834948","noduerme","It's rather nice looking, but it would have been so much nicer if you'd done it yourself.",{"id":102,"by":103,"text":104},"46838477","kasperset","It looks nice but very \"LLMsy\". I liked that it specifically annotates \"Lytic\" vs \"Lysogenic\" categorization for phages. Important in terms of virome analysis.…",[106,118,123,132,139],{"value":107,"source":80,"evidence":108},"Scientific inaccuracies in diagrams and genetic representations",[109,113,117],{"id":110,"by":111,"text":112},"46835767","jryb","This is so riddled with inaccuracies that I can spot them immediately despite not being a phage biologist. For example, the PhiX image has a DNA with about 20 base pairs - wildly…",{"id":114,"by":115,"text":116},"46834857","Tiberium","Sorry, but I really wouldn't trust a website that uses Gemini's image models for generating scientific diagrams. The website itself is also vibe-coded. That's not an issue by…",{"id":102,"by":103,"text":104},{"value":119,"source":80,"evidence":120},"AI-generated images unsuitable for scientific content",[121,122],{"id":114,"by":115,"text":116},{"id":83,"by":84,"text":85},{"value":124,"source":80,"evidence":125},"Generic vibe-coded LLM look and layout issues",[126,127,128],{"id":114,"by":115,"text":116},{"id":102,"by":103,"text":104},{"id":129,"by":130,"text":131},"46835083","makerofthings","AI really loves that purple-blue style with rounded corners. I asked chatGPT to make a few sites to see how it worked and any time I said \"make the site look nicer\", it did that.…",{"value":133,"source":80,"evidence":134},"Unclear UI behaviour and needs polish",[135],{"id":136,"by":137,"text":138},"46834184","jadengeller","some quick feedback on the user interface: - i pressed \"Amino Acids\", and nothing updated below the toolbar. can't figure out what it does - the \"Tools\" buttons looks like a…",{"value":140,"source":80,"evidence":141},"Debate over whether AI-built work counts as made by the maker",[142,143,146],{"id":98,"by":99,"text":100},{"id":144,"by":99,"text":145},"46843655","If he paid the same amount of money to an offshore worker to build it, would you say he'd done it himself?",{"id":147,"by":99,"text":148},"46852878","This is ridiculous. If you are capable of editing the libraries when necessary, and you don't ask someone else to do it for you, then yes. If you can't do it yourself and need to…",[150,158,162,166],{"value":151,"source":80,"evidence":152},"Have domain experts verify accuracy",[153,154],{"id":87,"by":88,"text":89},{"id":155,"by":156,"text":157},"46837282","codingminds","At least put a big warning in your introduction box that highlights that those data might be invalid because you are not an expert in this topic. Let the use acknowledge this…",{"value":159,"source":80,"evidence":160},"Use scientifically accurate images from papers or repositories",[161],{"id":83,"by":84,"text":85},{"value":163,"source":80,"evidence":164},"Add warning that data may be invalid",[165],{"id":155,"by":156,"text":157},{"value":167,"source":80,"evidence":168},"Add annotations and domain labels to structures",[169],{"id":110,"by":111,"text":112},[171],{"value":172,"source":80,"evidence":173},"How many tokens or how much AI was used to build it",[174,178],{"id":175,"by":176,"text":177},"46834687","jurgenaut23","What used to be a life time project that would inspire awe and respect and make OP an instant hire for most managers is now a fun 1-week stunt that makes you go “cool, how many…",{"id":179,"by":99,"text":180},"46834907",">> what I ended up with has taken a sickening number of tokens to generate I was a bit confused by this as to whether it related only to the graphics or to the UI as well.",[182,186],{"value":183,"source":80,"evidence":184},"Existing biology tools and annotated bioinformatics software",[185],{"id":110,"by":111,"text":112},{"value":187,"source":80,"evidence":188},"Textbooks and structured courses",[189,190],{"id":110,"by":111,"text":112},{"id":191,"by":111,"text":192},"46850347","Sure, but there apparently wasn't enough of a dialog either. With a textbook, you're confronted with facts and explanations that you didn't ask about, or even knew to ask about.…",{"comments":194,"answered":32,"key":195},2,[196,199],{"id":197,"text":198},"46835387","I find this to be a bizarre sentiment. It’s an artifact that exists. The chances of me making this by hand are 0. This would be a full time job for 3 years to research and build…",{"id":200,"text":201},"46835364","Look at the commit history. I’ve been working on this essentially every single day for over a month.",{"commenters":203,"max_depth":204,"maker_replies":194,"first_comment_mins":205,"lifespan_hours":206},17,7,102,95,[208,210,212,214,216,218,219,222,225,228,229,231,233,236,237,239,241,243,245,247,251,254,255,258,261,263,265,267,269,271,273,276,278,281,285],[83,38,31,209,84,38],"project\u002Fmixed\u002Fdesign",[114,32,32,211,115,38],"project\u002Fcritical\u002Fexecution",[179,32,38,213,99,38],"other\u002Fneutral\u002Fnone",[129,194,38,215,130,38],"other\u002Fneutral\u002Fdesign",[155,31,32,217,156,38],"project\u002Fcritical\u002Fdocs",[110,33,32,211,111,38],[220,33,38,213,221,38],"46842837","jart",[223,33,38,224,111,38],"46846819","commenter\u002Fneutral\u002Fdocs",[226,33,38,227,221,38],"46848651","commenter\u002Fneutral\u002Fnone",[191,33,38,224,111,38],[230,33,38,213,221,38],"46881297",[98,34,31,232,99,38],"maker\u002Fmixed\u002Fdesign",[234,34,38,227,235,38],"46835269","stavros",[144,34,38,227,99,38],[238,34,38,227,235,38],"46845038",[240,34,38,227,99,38],"46847873",[242,34,38,227,235,38],"46847965",[147,34,38,244,99,38],"commenter\u002Fcritical\u002Fnone",[197,34,38,246,10,32],"project\u002Fpositive\u002Fexecution",[248,34,38,249,250,38],"46836076","commenter\u002Fcritical\u002Fexecution","flexagoon",[136,252,32,253,137,38],6,"project\u002Fcritical\u002Fdesign",[102,204,31,209,103,38],[175,256,31,257,176,38],8,"maker\u002Fmixed\u002Fidea",[259,256,38,227,260,38],"46834859","tgv",[262,256,38,227,99,38],"46834934",[264,256,38,227,176,38],"46835206",[266,256,38,227,235,38],"46835303",[268,256,32,211,156,38],"46837305",[270,256,38,227,235,38],"46837343",[272,256,38,227,176,38],"46837841",[274,256,31,275,235,38],"46838380","maker\u002Fneutral\u002Fidea",[200,256,38,277,10,32],"maker\u002Fpositive\u002Fexecution",[87,279,34,280,88,38],9,"project\u002Fpositive\u002Fidea",[282,283,34,280,284,38],"46834575",10,"mentalgear",[91,286,34,280,92,38],11,[],[289,294,299,304,308,313],{"id":290,"name":291,"points":292,"category":293},"46847690","Craftplan",577,"web_saas",{"id":295,"name":296,"points":297,"category":298},"46850205","NanoClaw",533,"ai",{"id":300,"name":301,"points":302,"category":303},"46832074","ear",469,"languages",{"id":305,"name":306,"points":307,"category":19},"46850803","Xikipedia",441,{"id":309,"name":310,"points":311,"category":312},"46882389","Ghidra MCP Server",298,"dev_tools",{"id":314,"name":315,"points":316,"category":317},"46868479","Safe-now.live",195,"infrastructure",15,false,"v2",{"id":322,"name":5,"line":5,"ai":319,"cat":19,"year":12,"points":13,"comments":14,"rec":28,"s":323,"top":17,"kw":324,"maker":10,"domain":9,"tier":18,"attempts":38,"strip":325,"url":8,"mix":326,"praise":79,"objection":107,"sub":20},46833754,-0.07,[23,24,25,26,27],"31001100000300000000133000010030555",[31,32,33,34],1794036691880]